Mark Chiew

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Curriculum Vitae - Mark Chiew

Physical Sciences Platform
Sunnybrook Research Institute
Department of Medical Biophysics
University of Toronto
 
mark.chiew@utoronto.ca
https://mchiew.github.io		 Sunnybrook Health Sciences Centre
M6-605, 2075 Bayview Avenue
Toronto, Ontario, Canada M4N 3M5
Telephone: +1 416-480-6100 ext. 61018

Work & Education

Academic Positions

2022 - 27 Tier 2 Canada Research Chair in Computational Biomedical Imaging
University of Toronto
2022 - Associate Professor
Department of Medical Biophysics, University of Toronto
2022 - Scientist
Physical Sciences Platform, Sunnybrook Research Institute
2021 - Associate Professor
Nuffield Department of Clinical Neurosciences, University of Oxford
2018 - 21 University Research Lecturer
Nuffield Department of Clinical Neurosciences, University of Oxford
2017 - 22 Royal Academy of Engineering Research Fellow
FMRIB Centre, University of Oxford
2012 - 17 Post-Doctoral Researcher
FMRIB Centre, University of Oxford

Education

2007 - 12 Ph.D., Medical Biophysics, University of Toronto
Thesis: Development and Application of Methods for Real-Time fMRI Neurofeedback
Supervisor: Prof. Simon J. Graham
2002 - 07 B.ASc, Engineering Physics, University of British Columbia
Math Honours, Electrical Engineering Option

Grants & Awards

Funding

2024 - 25 Canadian Institutes of Health Research Bridge Grant
Rapid Diagnostic Imaging of Brain Metastases using Computational MRI
Principal Investigator		 $100,000
2023 - 28 CFI John R. Evans Leaders Fund
Next Gen Computational MRI for Rapid Neuroimaging and Image-Guided Therapy
Principal Investigator		 $390,247
2023 - 28 NSERC Discovery Grant
Computational Methods for Rapid and Robust Magnetic Resonance Imaging
Principal Investigator (RGPIN/2023-03410)		 $197,500
2022 - 27 Tier 2 Canada Research Chair
Computational Biomedical Imaging
Principal Investigator		 $600,000
2020 - 23 EPSRC Healthcare Technologies New Investigator Award
Robust 3D Functional Imaging of the Living, Breathing Brain
Principal Investigator (EP/T013133/1)		 £352,921
2017 - 22 Royal Academy of Engineering Research Fellowship
Characterising the Brain’s Spatio-Temporal Dynamics by Integrating EEG and FMRI
Principal Investigator (RF201617\16\23)		 £499,715
2017 - 19 John Fell Oxford University Press Research Fund
A Novel Approach to EEG and FMRI
Principal Investigator		 £57,800
2019 - 20 WIN Seed Grant
Advanced Brain Blood Flow Measurements with 7T MRI
Co-Principal Investigator		 £9,000

Grant Collaborations

2024 - 25 Ontario Research Fund - Research Excellence
Rapid Diagnostic Imaging of Brain Metastases using Computational MRI
Collaborator (PI: Simon Graham)		 $2,000,000
2024 - 29 Science Foundation Ireland Frontiers for the Future
Robust Motion Correction for Functional MRI using Deep Neural Networks
Collaborator (PI: Rhodri Cusack)		 €999,810

Awards

2019,23 WIN Good Citizen Award
2015 - 24 Magnetic Resonance in Medicine Distinguished Reviewer
2015 ISMRM I.I. Rabi Young Investigator Award Finalist
2014,15 University of Oxford Award for Excellence
2015 Guarantors of Brain Travel Grant
2013,14 University of Oxford Lockey Bequest Grant
2014 OHBM Trainee Abstract Award
2011,13,14 ISMRM Trainee Stipend Award
2011 Ontario Graduate Scholarship
2010 University of Toronto Medical Biophysics Excellence Award
2009,10 Jack and Rita Catherall Fund Travel Award
2009 - 10 Ydessa Hendeles Graduate Scholarship
2008 - 10 Ontario Graduate Scholarship in Science and Technology
2006 John Collison Memorial Scholarship in Mathematics
2004,05 UBC Undergraduate Scholars Program Award
2002 British Columbia Provincial Scholarship

Invited Talks

  1. Self-Supervised Learning and Friends - Computational Methods for MRI in Incomplete and Corrupted Data Regimes, Carle Illinois Advanced Imaging Center Seminar, University of Illinois Urbana-Champaign, USA; Sept 2024
  2. Ultrahigh Resolution fMRI at 7T using Radial-Cartesian TURBINE Sampling, Center for Advanced Imaging, University of Queensland (Virtual); Jan 2023
  3. Computational Methods for Rapid and Robust Neuroimaging, BRAIN-TO Lab, University Health Network, Toronto, Canada; Sept 2022
  4. Neuroimaging with Optimized Sampling and Reconstruction, Keilholz Mind Lab, Georgia Tech and Emory University (Virtual); April 2021
  5. Fast and Robust MR Imaging with Constrained Reconstruction Methods, Champalimaud Centre for the Unknown, Lisbon, Portugal; Dec 2019
  6. Getting more information from fMRI with better sampling and reconstruction, KCL Centre for Neuroimaging Sciences, Neuroimaging Seminar, London, UK; Mar 2019
  7. Getting more out of fMRI data using constrained reconstructions and simultaneous EEG, Center for Functional MRI, UC San Diego, USA; Oct 2018
  8. Beyond Simultaneous: Integrating EEG Information for Image Reconstruction in FMRI, UCL Centre for Neuroimaging Techniques Seminar, London, UK; Dec 2017
  9. Basics, Benefits, and Breakthroughs for Fast Brain Imaging, BC Children’s Hospital, Vancouver, Canada; Jun 2017
  10. Accelerating FMRI Data Acquisition using Hybrid Radial-Cartesian Sampling and Low-Rank Constraints, Centre for the Developing Brain Seminar Series, Kings College London, London, UK; Oct 2016
  11. Using network models of brain activity to inform highly accelerated fMRI data acquisition, MR Seminar, Institute of Biomedical Engineering, ETH Zurich, Zurich, Switzerland; Feb 2016
  12. The Utility of Low-Rank Models for Acquisition & Analysis of FMRI Data, Institute of Psychiatry, Psychology & Neuroscience, Kings College London, London, UK; Oct 2015
  13. Accelerating FMRI Data Acquisition using Low-Rank Constraints, NeuroImaging Interest Group Rounds, Hospital for Sick Children, Toronto, Canada; Jun 2015
  14. Accelerating FMRI Data Acquisition using Rank Constraints, Max Planck Institute for Biological Cybernetics, Tuebingen,Germany; Feb 2014
  15. Estimation of Resting State Networks from Undersampled k-t FMRI Data using Matrix Completion, SMIAL Seminar Series, Sunnybrook Research Institute, Toronto, Canada; Jun 2013

Publications

Preprints

  1. Priestley L, Chiew M, Shahdloo M, Mahmoodi A, Cheng X, Cleveland R, Rushworth M, Khalighinejad N. Dorsal Raphe Nucleus Controls Motivational State Transitions in Monkeys, 2024;
  2. Alcicek S, Craig-Craven AR, Shen X, Chiew M, Ozen A, Sawiak S, Pilatus U, Emir U. Multi-site Ultrashort Echo Time 3D Phosphorous MRSI repeatability using novel Rosette Trajectory (PETALUTE), 2024;
  3. Millard C, Chiew M. Clean self-supervised MRI reconstruction from noisy, sub-sampled training data with Robust SSDU, 2024;
  4. Millard C, Chiew M, Tanner J, Hess AT, Mailhe B. Tuning-free multi-coil compressed sensing MRI with Parallel Variable Density Approximate Message Passing (P-VDAMP), 2022;
  5. Schauman SS, Okell TW, Chiew M. The Set Increment with Limited Views Encoding Ratio (SILVER) Method for Optimizing Radial Sampling of Dynamic MRI, 2021;
  6. Xia P, Chiew M, Zhou X, Thomas A, Dydak U, Emir UE. Density-Weighted Concentric Ring Trajectory using simultaneous multi-band acceleration: 3D Metabolite-cycled Magnetic Resonance Spectroscopy Imaging at 3 T, 2019;

Journal Articles

  1. Li Z, Miller KL, Chen X, Chiew M, Wu W. Self-navigated 3D diffusion MRI using an optimized CAIPI sampling and structured low-rank reconstruction estimated navigator, IEEE Transactions on Medical Imaging 2024; :1–1
  2. Villarreal CX, Shen X, Alhulail AA, Buffo NM, Zhou X, Pogue E, Özen AC, Chiew M, Sawiak S, Emir U, Chan DD. An accelerated PETALUTE MRI sequence for in vivo quantification of sodium content in human articular cartilage at 3T, Skeletal Radiology 2024;
  3. Kent JL, Buck MHS de, Dragonu I, Chiew M, Valkovič L, Hess AT. Accelerated 3D multi-channel mapping at 7 T for the brain and heart, Magnetic Resonance in Medicine 2024; 92(5):2007–2020
  4. Shen Q, Wu W, Chiew M, Ji Y, Woods JG, Okell TW. Efficient 3D cone trajectory design for improved combined angiographic and perfusion imaging using arterial spin labeling, Magnetic Resonance in Medicine 2024; 92(4):1568–1583
  5. Shahdloo M, Khalighinejad N, Priestley L, Rushworth M, Chiew M. Dynamic off-resonance correction improves functional image analysis in fMRI of awake behaving non-human primates, Frontiers in Neuroimaging 2024; 3
  6. Farley N, Susnjar A, Chiew M, Emir UE. Test–Retest Reproducibility of Reduced-Field-of-View Density-Weighted CRT MRSI at 3T, Tomography 2024; 10(4):493–503
  7. Chen X, Wu W, Chiew M. Motion compensated structured low-rank reconstruction for 3D multi-shot EPI, Magnetic Resonance in Medicine 2024; 91(6):2443–2458
  8. Millard C, Chiew M. A Theoretical Framework for Self-Supervised MR Image Reconstruction Using Sub-Sampling via Variable Density Noisier2Noise, IEEE Transactions on Computational Imaging 2023; 9:707–720
  9. Tendler BC, Welland M, Miller KL, The WIN Handbook Team. Why every lab needs a handbook, eLife 2023; 12:e88853
  10. Shen X, Özen AC, Monsivais H, Susnjar A, Ilbey S, Zheng W, Du Y, Chiew M, Emir U. High-resolution 3D ultra-short echo time MRI with Rosette k-space pattern for brain iron content mapping, Journal of Trace Elements in Medicine and Biology 2023; 77:127146
  11. Chen X, Wu W, Chiew M. Improving robustness of 3D multi-shot EPI by structured low-rank reconstruction of segmented CAIPI sampling for fMRI at 7T, NeuroImage 2023; 267:119827
  12. Okell TW, Chiew M. Optimization of 4D combined angiography and perfusion using radial imaging and arterial spin labeling, Magnetic Resonance in Medicine 2023; 89(5):1853–1870
  13. Woods JG, Schauman SS, Chiew M, Chappell MA, Okell TW. Time-encoded pseudo-continuous arterial spin labeling: Increasing SNR in ASL dynamic angiography, Magnetic Resonance in Medicine 2023; 89(4):1323–1341
  14. Shen X, Özen AC, Sunjar A, Ilbey S, Sawiak S, Shi R, Chiew M, Emir U. Ultra-short T2 components imaging of the whole brain using 3D dual-echo UTE MRI with rosette k-space pattern, Magnetic Resonance in Medicine 2023; 89(2):508–521
  15. Graedel NN, Miller KL, Chiew M. Ultrahigh Resolution fMRI at 7T Using Radial-Cartesian TURBINE Sampling, Magnetic Resonance in Medicine 2022; 88(5):2058–2073
  16. Lu Y, Wiltshire CEE, Watkins KE, Chiew M, Goldstein L. Characteristics of articulatory gestures in stuttered speech: A case study using real-time magnetic resonance imaging, Journal of Communication Disorders 2022; 97:106213
  17. Shahdloo M, Schüffelgen U, Papp D, Miller KL, Chiew M. Model-based dynamic off-resonance correction for improved accelerated fMRI in awake behaving nonhuman primates, Magnetic Resonance in Medicine 2022; 87(6):2922–2932
  18. Clarke WT, Chiew M. Uncertainty in denoising of MRSI using low-rank methods, Magnetic Resonance in Medicine 2022; 87(2):574–588
  19. Mason HT, Graedel NN, Miller KL, Chiew M. Subspace-constrained approaches to low-rank fMRI acceleration, NeuroImage 2021; 238:118235
  20. Hess AT, Dragonu I, Chiew M. Accelerated calibrationless parallel transmit mapping using joint transmit and receive low-rank tensor completion, Magnetic Resonance in Medicine 2021; 86(5):2454–2467
  21. Wiltshire CEE, Chiew M, Chesters J, Healy MP, Watkins KE. Speech Movement Variability in People Who Stutter: A Vocal Tract Magnetic Resonance Imaging Study, Journal of Speech, Language, and Hearing Research 2021; 64(7):2438–2452
  22. Emir UE, Sood J, Chiew M, Thomas MA, Lane SP. High-resolution metabolic mapping of the cerebellum using 2D zoom magnetic resonance spectroscopic imaging, Magnetic Resonance in Medicine 2021; 85(5):2349–2358
  23. Wang C, Foxley S, Ansorge O, Bangerter-Christensen S, Chiew M, Leonte A, Menke RA, Mollink J, Pallebage-Gamarallage M, Turner MR, Miller KL, Tendler BC. Methods for quantitative susceptibility and R2* mapping in whole post-mortem brains at 7T applied to amyotrophic lateral sclerosis, NeuroImage 2020; 222:117216
  24. Schauman SS, Chiew M, Okell TW. Highly accelerated vessel-selective arterial spin labeling angiography using sparsity and smoothness constraints, Magnetic Resonance in Medicine 2020; 83(3):892–905
  25. Chiew M, Miller KL. Improved statistical efficiency of simultaneous multi-slice fMRI by reconstruction with spatially adaptive temporal smoothing, NeuroImage 2019; 203:116165
  26. O’Brien C, Okell TW, Chiew M, Jezzard P. Volume-localized measurement of oxygen extraction fraction in the brain using MRI, Magnetic Resonance in Medicine 2019; 82(4):1412–1423
  27. Steel A, Chiew M, Jezzard P, Voets NL, Plaha P, Thomas MA, Stagg CJ, Emir UE. Metabolite-cycled density-weighted concentric rings k-space trajectory (DW-CRT) enables high-resolution 1 H magnetic resonance spectroscopic imaging at 3-Tesla, Scientific Reports 2018; 8(1):7792
  28. Chiew M, Graedel NN, Miller KL. Recovering task fMRI signals from highly under-sampled data with low-rank and temporal subspace constraints., NeuroImage 2018; 174:97–110
  29. Chiew M, Jiang W, Burns B, Larson P, Steel A, Jezzard P, Albert Thomas M, Emir UE. Density-weighted concentric rings k-space trajectory for1H magnetic resonance spectroscopic imaging at 7 T., NMR in biomedicine 2018; 31(1):e3838
  30. Weizman L, Miller KL, Eldar YC, Chiew M. PEAR: PEriodic And fixed Rank separation for fast fMRI., Medical physics 2017; 44(12):6166–6182
  31. Emir UE, Burns B, Chiew M, Jezzard P, Thomas MA. Non-water-suppressed short-echo-time magnetic resonance spectroscopic imaging using a concentric ring k-space trajectory, NMR in Biomedicine 2017; 30(7):e3714
  32. Graedel NN, Mcnab JA, Chiew M, Miller KL. Motion correction for functional MRI with three-dimensional hybrid radial-Cartesian EPI., Magnetic resonance in medicine 2017; 78(2):527–540
  33. Chiew M, Graedel NN, Mcnab JA, Smith SM, Miller KL. Accelerating functional MRI using fixed-rank approximations and radial-cartesian sampling., Magnetic resonance in medicine 2016; 76(6):1825–1836
  34. Chiew M, Smith SM, Koopmans PJ, Graedel NN, Blumensath T, Miller KL. K-t FASTER: Acceleration of functional MRI data acquisition using low rank constraints., Magnetic resonance in medicine 2015; 74(2):353–364
  35. Olsen RK, Chiew M, Buchsbaum BR, Ryan JD. The relationship between delay period eye movements and visuospatial memory, Journal of Vision 2014; 14(1):1–11
  36. Chiew M, Graham SJ. Constrained source space imaging: Application to fast, region-based functional MRI., Magnetic resonance in medicine 2013; 70(4):1058–1069
  37. Rotenberg D, Chiew M, Ranieri S, Tam F, Chopra R, Graham SJ. Real-time correction by optical tracking with integrated geometric distortion correction for reducing motion artifacts in functional MRI, Magnetic Resonance in Medicine 2013; 69(3):734–748
  38. Chiew M, LaConte SM, Graham SJ. Investigation of fMRI neurofeedback of differential primary motor cortex activity using kinesthetic motor imagery, NeuroImage 2012; 61(1):21–31
  39. Chiew M, Graham SJ. BOLD Contrast and Noise Characteristics of Densely Sampled Multi-Echo fMRI Data., IEEE transactions on medical imaging 2011; 30(9):1691–1703
  40. Yancey SE, Rotenberg DJ, Tam F, Chiew M, Ranieri S, Biswas L, Anderson KJT, Baker SN, Wright GA, Graham SJ. Spin-history artifact during functional MRI: Potential for adaptive correction., Medical physics 2011; 38(8):4634–4646
  41. Kuo AY-C, Chiew M, Tam F, Cunningham C, Graham SJ. Multiecho coarse voxel acquisition for neurofeedback fMRI., Magnetic resonance in medicine 2011; 65(3):715–724

Conference Papers

  1. Sheagren CD, Kadota BT, Patel JH, Chiew M, Wright GA. Accelerated Cardiac Parametric Mapping Using Deep Learning-Refined Subspace Models, Statistical Atlases and Computational Models of the Heart. Regular and CMRxRecon Challenge Papers 2024; :369–379
  2. Chen X, Wu W, Chiew M. Locally Structured Low-Rank MR Image Reconstruction using Submatrix Constraints, 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI) 2022; :1–4
  3. Weizman L, Miller KL, Eldar YC, Maayan O, Chiew M. PEAR: PEriodic and ApeRiodic signal separation for fast FMRI, 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) 2017; :505–508

Conference Abstracts

  1. Li Z, Miller KL, Chen X, Chiew M, Wu W. Self-navigated 3D multi-slab EPI for SNR-efficient high-resolution diffusion MRI, International Society for Magnetic Resonance in Medicine Annual Meeting 2024; (oral presentation)
  2. Lipka A, Sawiak S, Shen X, Emir UE, Özen A, Chiew M, Speth J, Chang D-Y, Jiang Z, Tamer G, Scarpelli M. Accelerated Preclinical UHF Abdominal T1 Mapping using Novel Rosette Ultrashort Echo Time (PETALUTE), International Society for Magnetic Resonance in Medicine Annual Meeting 2024; (oral power-pitch presentation)
  3. Kadota B, Millard C, Chiew M. Joint Multi-Contrast Image Reconstruction with Self-Supervised Learning, International Society for Magnetic Resonance in Medicine Annual Meeting 2024;
  4. Millard C, Chiew M. Simultaneous self-supervised reconstruction and denoising for low SNR, sub-sampled training data with Robust SSDU, International Society for Magnetic Resonance in Medicine Annual Meeting 2024; (oral presentation)
  5. Shen Q, Wu W, Chiew M, Ji Y, Woods J, Okell TW. Motion correction with subspace-based self-navigation for combined angiography, perfusion and structural imaging using ASL, International Society for Magnetic Resonance in Medicine Annual Meeting 2024;
  6. Beitone C, Chiew M, Miller KL, Bangerter NK, Lally PJ. Fluctuating Equilibrium MR with partial RF spoiling: A parallel contrast imaging technique, International Society for Magnetic Resonance in Medicine Annual Meeting 2024;
  7. Millard C, Chiew M. A self-supervised method for recovering clean images from noisy, sub-sampled training examples, Northern Lights Deep Learning Conference 2024;
  8. Chen X, Wu W, Chiew M. Motion Compensated Structured Low-rank Reconstruction for Robust 3D Multi-shot EPI fMRI, International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral presentation)
  9. Millard C, Chiew M. Using Noisier2Noise To Choose The Sampling Mask Partition Of Self-Supervised Learning Via Data Undersampling (SSDU), International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral power-pitch presentation)
  10. Woods JG, Chiew M, Okell TW. Minimizing SAR For SNR-Efficient Pseudo-Continuous Arterial Spin Labeling At 7T, International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral presentation)
  11. Shen Q, Chiew M, Wu W, Okell TW. Efficient 3D Cone Trajectory Design For Improved Combined Angiographic, Structural And Perfusion Imaging Using Arterial Spin Labelling, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  12. Shen Q, Chiew M, Wu W, Okell TW. Subspace Reconstruction Of High Temporal Resolution Arterial Spin Labeling Angiography Using A Kinetic Model, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  13. Leung BY, Staruch RM, Chiew M. Accelerated MRI Thermometry Guidance For Transurethral Ultrasound Ablation Of The Prostate Using Locally Low Rank Reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  14. Li Z, Chen X, Chiew M, Miller KL, Wu W. Self-Navigated High-Resolution 3D Diffusion MRI Using An Extended Blipped-CAIPI Sampling And Structured Low-Rank Reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  15. Kent JL, Valkovic L, Dragonu I, Chiew M, Hess AT. Pilot Tone Vs PTx Scattering: A Comparison Between “RF Sensor” Methods For Rigid Body Motion Detection Of The Brain At 7T, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  16. Kent JL, Valkovic L, Dragonu I, Chiew M, Hess AT. Accelerated Volumetric Multi-Channel PTx B1+ Mapping At 7T For The Brain And Heart, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  17. Lally PJ, Chiew M, Matthews PM, Miller KL, Bangerter NK. SNR-Efficient, Motion-Robust Multi-Echo SPGR With K-Space Aliasing, International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral presentation)
  18. Bozymski B, Shen X, Özen AC, Ilbey S, Thomas MA, Chiew M, Clarke WT, Dydak U, Emir UE. Comparison Of Compressed Sensing Accelerated Rosette UTE And Conventional 31P 3D MRSI At 3T In Leg Muscle, International Society for Magnetic Resonance in Medicine Annual Meeting 2023;
  19. Monsivais H, Nossa G, Hong S, Park T, Erdil FS, Shen X, Susnjar A, Özen AC, Ilbey S, Chiew M, Huber J, Dydak U, Emir UE. Ultrashort-Echo Time Magnetization Transfer (UTE-MT) For Brain Iron Imaging, International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral power-pitch presentation)
  20. Nossa G, Monsivais H, Hong S, Park T, Erdil FS, Shen X, Özen AC, Ilbey S, Chiew M, Steinwurzel C, Kourtzi Z, Shih Y-YI, Emir UE. Submillimeter FMRI Acquisition Using A Dual-Echo Rosette-K-Space Trajectory At 3T, International Society for Magnetic Resonance in Medicine Annual Meeting 2023; (oral presentation)
  21. Shen Q, Chiew M, Wu W, Okell TW. Efficient 3D cone trajectory for improved combined angiographic and perfusion imaging using arterial spin labeling, ISMRM Workshop on Data Sampling & Image Reconstruction 2023; (oral presentation)
  22. Chen X, Wu W, Chiew M. Improved Structured Low-rank Reconstruction for 3D multi-shot EPI with Joint Motion Modelling, ISMRM Workshop on Data Sampling & Image Reconstruction 2023; (oral presentation)
  23. Lally PJ, Chiew M, Matthews PM, Miller KL, Bangerter NK. A motion-robust, short-TR alternative to multi-echo SPGR, ISMRM Workshop on Data Sampling & Image Reconstruction 2023; (oral presentation)
  24. Millard C, Chiew M. A framework for self-supervised MR image reconstruction using sub-sampling via Noisier2Noise, BASP Frontiers Workshop 2023;
  25. Okell TW, Woods JC, Chiew M. Combined Angiographic, Structural and Perfusion Radial Imaging using Arterial Spin Labeling, International Society for Magnetic Resonance in Medicine Annual Meeting 2022; (oral presentation)
  26. Chen X, Wu W, Chiew M. A Locally Structured Low-Rank Tensor Method Using Submatrix Constraints for Joint Multi-echo Image Reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  27. Shahdloo M, Chiew M. Optimal Singular-Value Shrinkage for fMRI Denoising, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  28. Lally PJ, Statton B, Matthews PM, Chiew M, Miller KL, Bangerter NK. SNR-efficient SSFP with k-space aliasing, International Society for Magnetic Resonance in Medicine Annual Meeting 2022; (oral presentation)
  29. Bozymski B, Shen X, Özen A, Ilbey S, Thomas MA, Chiew M, Dydak U, Emir UE. Ultra-Short Echo Time 31P 3D MRSI at 3T with Novel Rosette k-space Trajectory, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  30. Karnik A, Shen X, Monsivais H, Sunjar A, Özen A, Ilbey S, Chiew M, Cakmak M, Rispoli J, Emir UE. Quantitative Susceptibility Mapping (QSM) Using High-resolution Ultra-Short Echo Time (UTE) MRI with Rosette k-space Pattern, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  31. Ooms N, Shen X, Özen A, Ilbey S, Chiew M, Emir UE. Pulmonary imaging Using 3D Dual-Echo FID Ultra-short Echo Time MRI with Rosette k-space Pattern: Introduction and Feasibility., International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  32. Shen X, Özen A, Sunjar A, Ilbey S, Shi R, Chiew M, Emir UE. Myelin Imaging Using 3D Dual-echo Ultra-short Echo Time MRI with Rosette k-Space Pattern, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  33. Villarreal C, Shen X, Özen A, Ilbey S, Chiew M, Alhulial A, Pogue E, Emir UE, Chan D. Compressed sensing and the use of 3D UTE acquisition for high-resolution accelerated 23NA imaging at 3T, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  34. Monsivais H, Shen X, Susnjar A, Özen A, Ilbey S, Chiew M, Karnik A, Emir UE, Dydak U. Iron Imaging with 3D Multi-Gradient Recalled Echo (3D-mGRE) and 3D Ultra-short Echo (3D-UTE) Sequences: A Phantom Comparison Study, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  35. Shen X, Özen A, Monsivais H, Ilbey S, Susnjar A, Karnik A, Chiew M, Emir UE. High Resolution 3D Ultra-Short Echo Time MRI with Rosette k-Space Pattern for Brain Iron Content Mapping, International Society for Magnetic Resonance in Medicine Annual Meeting 2022;
  36. Okell TW, Woods JC, Chiew M. Combined Angiographic, Structural and Perfusion Radial Imaging using Arterial Spin Labeling, ISMRM Workshop on Perfusion MRI 2022; (oral presentation)
  37. Lu Y, Wiltshire CEE, Watkins KE, Chiew M, Goldstein L. Articulation of metronome-timed speech in people who stutter, Conference on Motor Speech 2022;
  38. Holmgren J, Prisco L, Chiew M, Jbabdi S, Allen M, Sleigh J, Tracey I, Warnaby CE. Auditory and pain processing is severely disrupted at slow wave activity saturation under general anaesthesia, International Anesthesia Research Society Annual Meeting 2021;
  39. Shen X, Chiew M, Emir UE. Development of 3D Rosette K-Space Trajectory in Ultra-Short Echo Time MRI Applications, American Association of Physicists in Medicine Annual Meeting 2021;
  40. Shahdloo M, Papp D, Schuffelgen U, Miller KL, Rushworth MFS, Chiew M. Highly accelerated fMRI of awake behaving non-human primates via model-based dynamic off-resonance correction, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  41. Chiew M. Variable Density Phase Encoding for High Resolution Single-Shot EPI, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  42. Chen X, Wu W, Chiew M. Respiratory fluctuations in 3D fMRI from inter-shot phase variations can be reduced by low-rank reconstruction of segmented CAIPI sampling, International Society for Magnetic Resonance in Medicine Annual Meeting 2021; (oral presentation)
  43. Clarke WT, Chiew M. Characterising the variance and reproducibility of low rank denoising methods for spectroscopic data, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  44. Schauman SS, Okell TW, Chiew M. Optimizing the fixed angular increment between k-space spokes can lead to improved SNR in radial imaging, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  45. Wood TC, Ljungberg E, Chiew M. ZTE Infilling From Auto-calibration Neighbourhood Elements, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  46. Farley N, Zhou X, Chiew M, Thomas MA, Dydak U, Emir UE. Towards a Probabilistic Neurochemical atlas via parcellated approach using ZOOM MRSI, International Society for Magnetic Resonance in Medicine Annual Meeting 2021;
  47. Xia P, Zhou X, Chiew M, Thomas MA, Dydak U, Emir UE. Density-Weighted Concentric Ring Trajectory Using Simultaneous Multi-Slice Acceleration: 3D Magnetic Resonance Imaging at 3T, Joint AAPM COMP Virtual Meeting 2020;
  48. Almomen F, Xia P, Zhou X, Chiew M, Steel A, Thomas MA, Dydak U, Emir UE. Simultaneous mapping of T2* and major neurotransmitters using MRSI at 3T, Organization for Human Brain Mapping Annual Meeting 2020; (oral presentation)
  49. Clarke WT, Chiew M. Comparison of low-rank denoising methods for accelerating the acquisition of 31P-MRSI, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  50. Chen X, Wu W, Chiew M. Reduced Inter-shot Physiological Variability in 3D Multi-Shot fMRI using Structured Low-Rank Matrix Completion, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  51. O’Brien C, Okell TW, Chiew M, Jezzard P. Remote Reconstructed Cerebral T2 Maps through Venous Blood Measurement in the Sagittal Sinus using SL-TRUST, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  52. Schauman SS, Woods JC, Chiew M, Okell TW. Highly accelerated time-encoded dynamic ASL angiography, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  53. Schauman SS, Okell TW, Chiew M. Radial sampling interactions in multi-dimensional sparse encoding problems using a joint decoding-reconstruction framework, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  54. Schauman SS, Okell TW, Chiew M. High resolution 4D vessel selective angiography in under 5 minutes using a constrained reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2020;
  55. Schauman SS, Okell TW, Chiew M. The SILVER method – an Improvement upon Radial Golden Ratio Sampling Within a Specified Window Size, ISMRM Workshop on Data Sampling & Image Reconstruction 2020;
  56. Schauman SS, Okell TW, Chiew M. Precision reconstruction for vessel-encoded ASL angiography, British Chapter ISMRM Annual Meeting 2019;
  57. Holmgren J, Prisco L, Chiew M, Jbabdi S, Allen M, Sleigh J, Tracey I, Warnaby CE. Auditory and pain processing is severely disrupted at slow wave activity saturation under general anaesthesia, British Journal of Anaesthesia 2019; 123:e514
  58. Hess AT, Jaeschke S, Chiew M. Click and run respiratory resolved, ECG and navigator free cardiac B0 and relative B1 calibration at 7T, ISMRM Workshop on Ultrahigh Field Magnetic Resonance 2019;
  59. Hess AT, Tanner J, Dragonu I, Chiew M. Accelerated 3D relative transmit mapping using structured low-rank matrix completion – evaluated in the body and brain, ISMRM Workshop on Ultrahigh Field Magnetic Resonance 2019;
  60. Graedel NN, Miller KL, Chiew M. Ultra-high spatial resolution TURBINE fMRI at 7T, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral presentation)
  61. Mason HT, Miller KL, Graedel NN, Chiew M. Improving k-t PERRI: A low-rank data-driven fMRI k-t acceleration method, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral power-pitch presentation)
  62. Okell TW, Chiew M. High Resolution Perfusion Imaging using Golden Angle Radial Arterial Spin Labelling, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral power-pitch presentation)
  63. Schauman SS, Chiew M, Okell TW. 4D Vessel-Encoded pCASL Angiography in a Five-Minute Scan, University of Michigan International Workshop on Arterial Spin Labeling MRI 2019;
  64. Woods JC, Schauman SS, Chiew M, Chappell MA, Okell TW. Optimization of time-encoded pseudo-continuous ASL angiography with a variable flip-angle scheme, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral presentation)
  65. Schauman SS, Chiew M, Okell TW. Highly Accelerated Dynamic 2D and 3D Vessel-Encoded Arterial Spin Labelling Angiography, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral presentation)
  66. Emir UE, Xia P, Dydak U, Zhou X, Chiew M, Thomas MA, Guo R, Li Y, Zhao Y, Liang ZP. Non-Water suppressed High-Resolution 1H-MRSI of the Brain Using Short-TE SPICE with semi-LASER Concentric Ring Trajectory Acquisition, International Society for Magnetic Resonance in Medicine Annual Meeting 2019;
  67. Shen X, Xia P, Dehghani M, Near J, Zhou X, Chiew M, Dydak U, Emir UE. Simultaneous Measurement of functional MRI and MRS by Fast Non-water Suppressed MR Spectroscopy Imaging, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral presentation)
  68. Xia P, Shen X, Zhou X, Chiew M, Thomas MA, Dydak U, Emir UE. Density-Weighted Concentric Ring Trajectory using simultaneous multi-slice (SMS) acceleration: 3D Metabolite-cycled Magnetic Resonance Spectroscopy Imaging at 3 T, International Society for Magnetic Resonance in Medicine Annual Meeting 2019; (oral presentation)
  69. Chiew M, Holmgren J, Warnaby CE, Rieger S, Vannesjo SJ, Miller KL. Using Information Derived from Simultaneous EEG Measures to Inform MR Image Reconstruction, Gordon Research Conference 2018;
  70. Emir UE, Xia P, Zhou X, Chiew M, Thomas MA, Dydak U. Density-weighted concentric ring trajectory using simultaneous multi-slice (SMS) acceleration: 3D metabolite-cycled magnetic resonance spectroscopic imaging at 3 T, MRS Workshop 2018;
  71. Wiltshire CEE, Chesters J, Chiew M, Watkins KE. Assessing speech movements in people who stutter using real-time MRI of the vocal tract, Annual meeting of the society for the neurobiology of language 2018;
  72. Mason HT, Miller KL, Chiew M. Acceleration of Golden Angle-Sampled FMRI Data with Data-Driven Priors and Low-Rank Constraints, Organization for Human Brain Mapping Annual Meeting 2018; (oral presentation)
  73. Steel A, James G, Chiew M, Thomas MA, Emir UE, Stagg CJ. Regional GABA Concentrations Assessed by Magnetic Resonance Spectroscopic Imaging Predict Different Aspects of Motor Performance, Organization for Human Brain Mapping Annual Meeting 2018;
  74. Chiew M, Holmgren J, Fido D, Warnaby CE, Vannesjo SJ. Measuring MRI Gradient Trajectory Dynamics using Simultaneous EEG-FMRI, International Society for Magnetic Resonance in Medicine Annual Meeting 2018; (oral presentation)
  75. Schauman SS, Chiew M, Okell TW. Accelerated Acquisition of Vessel-Encoded Arterial Spin Labelling Angiograms with Compressed Sensing, International Society for Magnetic Resonance in Medicine Annual Meeting 2018;
  76. Chiew M, Okell TW. Improved Golden Ratio Radial Arterial Spin Labelling Angiography Reconstruction using k-t Sparsity Constraints, International Society for Magnetic Resonance in Medicine Annual Meeting 2018;
  77. Emir UE, Xia P, Zhou X, Chiew M, Steel A, Thomas MA, Dydak U. Non-Water Suppressed GABA Editing Magnetic Resonance Spectroscopic Imaging using Density Weighted Concentric Rings Trajectory, International Society for Magnetic Resonance in Medicine Annual Meeting 2018;
  78. Steel A, Chiew M, Jezzard P, Voets NL, Plaha P, Thomas MA, Stagg CJ, Emir UE. Metabolite cycled density-weighted concentric rings k-space trajectory (DW-CRT) enables 1H magnetic resonance spectroscopic imaging at 3 Tesla in a clinically feasible timeframe, International Society for Magnetic Resonance in Medicine Annual Meeting 2018;
  79. Mason HT, Miller KL, Chiew M. Acceleration of FMRI data with priors and low-rank constraints, Organization for Human Brain Mapping Annual Meeting 2017;
  80. Graedel NN, Chiew M, Miller KL. Exploring motion navigator choices in the TURBINE motion correction scheme for fMRI, Organization for Human Brain Mapping Annual Meeting 2017; (oral presentation)
  81. Chiew M, Holmgren J, Fido D, Warnaby CE, Miller KL. EEG-Informed Reconstruction of Accelerated FMRI Data Acquisition, Organization for Human Brain Mapping Annual Meeting 2017;
  82. Chiew M, Miller KL. Improving simultaneous multi-slice and 3D-EPI FMRI using rank-constrained reconstruction, Organization for Human Brain Mapping Annual Meeting 2017;
  83. Chiew M, Graedel NN, Holmgren J, Fido D, Warnaby CE, Miller KL. Accelerated rank-constrained FMRI data reconstruction informed by external temporal measures, International Society for Magnetic Resonance in Medicine Annual Meeting 2017; (oral presentation)
  84. Chiew M, Holmgren J, Graedel NN, Fido D, Warnaby CE, Miller KL. Correction of Gradient Artefacts in Simultaneous EEG-FMRI from Rotating Gradient Trajectories, International Society for Magnetic Resonance in Medicine Annual Meeting 2017;
  85. Chiew M, Jiang W, Larson PEZ, Burns B, Jezzard P, Thomas MA, Emir UE. Density Weighted Concentric Rings K-Space Trajectory for 1H MRSI with gradient offset independent adiabatic pulses at 7T, International Society for Magnetic Resonance in Medicine Annual Meeting 2017;
  86. Emir UE, Burns B, Chiew M, Jezzard P, Thomas MA. Metabolite-Cycling Short-Echo Time Magnetic Resonance Spectroscopic Imaging using a Concentric Ring k-space Trajectory, International Society for Magnetic Resonance in Medicine Annual Meeting 2017;
  87. Chiew M, Holmgren J, Fido D, Warnaby CE, Miller KL. Recovering Brain Network Structure from Highly Under-Sampled FMRI using Electrophysiological Constraints, BASP Frontiers Workshop 2017;
  88. Weizman L, Miller KL, Eldar YC, Chiew M. Acceleration of functional MRI data acquisition by separation of background and dynamic components, European Society for Magnetic Resonance in Medicine and Biology Annual Meeting 2016; (oral presentation)
  89. Guan C, Chiew M. Comparison of strict sparsity and low-rank constraints for accelerated FMRI data reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2016;
  90. Graedel NN, Chiew M, Miller KL. Motion correction for functional MRI with hybrid radial-Cartesian 3D EPI, International Society for Magnetic Resonance in Medicine Annual Meeting 2016; (oral presentation)
  91. Chiew M, Graedel NN, Miller KL. Promoting incoherence of radial x-f point spread functions using randomly perturbed golden angles, International Society for Magnetic Resonance in Medicine Annual Meeting 2016;
  92. Chiew M, Miller KL. Revisiting adaptive regularization for self-calibrated, dynamic parallel imaging reconstruction, International Society for Magnetic Resonance in Medicine Annual Meeting 2016;
  93. Guan C, Chiew M. Comparison of strict sparsity and low-rank constraints for accelerated FMRI data reconstruction, ISMRM Workshop on Data Sampling & Image Reconstruction 2016;
  94. Chiew M, Graedel NN, Smith SM, Miller KL. Sub-second Whole Brain FMRI using a Hybrid Radial-Cartesian Acquisition and Low-Rank Reconstruction, Organization for Human Brain Mapping Annual Meeting 2015;
  95. Chiew M, Graedel NN, Smith SM, Miller KL. Acceleration of task-based FMRI using k-t FASTER, International Society for Magnetic Resonance in Medicine Annual Meeting 2015;
  96. Chiew M, Graedel NN, Mcnab JA, Smith SM, Miller KL. 3D Hybrid Radial-Cartesian Sampling for Improved Resting State FMRI using k-t FASTER, International Society for Magnetic Resonance in Medicine Annual Meeting 2015;
  97. Chiew M, Smith SM, Koopmans PJ, Graedel NN, Blumensath T, Miller KL. K-t FASTER: Acceleration of FMRI Data Acquisition using Low Rank Constraints, International Society for Magnetic Resonance in Medicine Annual Meeting 2015;
  98. Graedel NN, Chiew M, Mcnab JA, Miller KL. FMRI using a 3D radial-Cartesian trajectory: Spatio-temporal tunability and artefact correction, International Society for Magnetic Resonance in Medicine Annual Meeting 2015; (oral presentation)
  99. Chiew M, Smith SM, Graedel NN, Blumensath T, Miller KL. Accelerating Resting State FMRI Acquisition using k-t FASTER: In Vivo Validation, Organization for Human Brain Mapping Annual Meeting 2014; (oral presentation)
  100. Graedel NN, Chiew M, Clare S, Miller KL. Complex interactions of physiological noise and acceleration on tSNR in 3D EPI, International Society for Magnetic Resonance in Medicine Annual Meeting 2014;
  101. Chiew M, Smith SM, Blumensath T, Miller KL. Joint multi-coil and low-rank constraints for accelerating FMRI data acquisition using k-t FASTER, International Society for Magnetic Resonance in Medicine Annual Meeting 2014;
  102. Chiew M, Smith SM, Graedel NN, Blumensath T, Miller KL. Application of k-t FASTER for rank-constrained acceleration of in vivo FMRI data, International Society for Magnetic Resonance in Medicine Annual Meeting 2014;
  103. Chiew M, Smith SM, Koopmans PJ, Graedel NN, Blumensath T, Miller KL. Low-Rank Acceleration of Resting FMRI Data Acquisition using k-t FASTER, Whistler Workshop of Brain Fuctional Organization, Connectivity and Behavior 2014; (oral presentation)
  104. Mansur A, Chiew M, Tam F, Schweizer TA, Graham SJ. Analysis of Fmri Neurofeedback of the Primary Motor Cortex as a Function of Time During Kinesthetic Motor Imagery, Canadian Stroke Congress 2013;
  105. Chiew M, Smith SM, Koopmans PJ, Blumensath T, Miller KL. Acceleration of Resting State FMRI Data Acquisition using Matrix Completion, Organization for Human Brain Mapping Annual Meeting 2013;
  106. Mansur A, Chiew M, Tam F, Schweizer TA, Graham SJ. General linear model regression analysis of fMRI neurofeedback of the primary motor cortex using kinesthetic motor imagery, Organization for Human Brain Mapping Annual Meeting 2013;
  107. Chiew M, Smith SM, Koopmans PJ, Blumensath T, Miller KL. K-t FASTER: A New Method for the Acceleration of Resting State FMRI Data Acquisition, International Society for Magnetic Resonance in Medicine Annual Meeting 2013;
  108. Chiew M, Miller KL, Koopmans PJ, Tunnicliffe EM, Smith SM, Blumensath T. Iterative Hard Thresholding and Matrix Shrinkage (IHT+MS) for Low-Rank Recovery of k-t Undersampled MRI Data, International Society for Magnetic Resonance in Medicine Annual Meeting 2013;
  109. Chiew M, Graham SJ. Direct SENSE imaging for fast, multi-echo fMRI over a restricted field of view, International Society for Magnetic Resonance in Medicine Annual Meeting 2012;
  110. Chiew M, LaConte SM, Graham SJ. fMRI Neurofeedback of Kinesthetic Motor Imagery, International Society for Magnetic Resonance in Medicine Annual Meeting 2012;
  111. Rotenberg DJ, Chiew M, Ranieri S, Tam F, Graham SJ. Real-time Motion Correction by Optical Tracking for Reducing Spin-History Artifacts in fMRI, Organization for Human Brain Mapping Annual Meeting 2011;
  112. Chiew M, LaConte SM, Graham SJ. Performance related brain differences in real-time fMRI neurofeedback of imagined hand motor activity, International Society for Magnetic Resonance in Medicine Annual Meeting 2011;
  113. Chiew M, Graham SJ. Effect of physiological noise on densely sampled multi-echo fMRI data, International Society for Magnetic Resonance in Medicine Annual Meeting 2011;
  114. Chiew M, LaConte SM, Graham SJ. Self-Regulation of Imagined Hand Motor Activity using Real-Time fMRI Neurofeedback, Organization for Human Brain Mapping Annual Meeting 2010;
  115. Chiew M, Graham SJ. A novel multi-echo fMRI weighting strategy using principal component analysis for BOLD contrast sensitivity enhancement, International Society for Magnetic Resonance in Medicine Annual Meeting 2010;
  116. Chiew M, Graham SJ. Modulating Brain Activity via Multi-Echo fMRI Neurofeedback, International Society for Magnetic Resonance in Medicine Annual Meeting 2009;

Book Chapters

  1. Chiew M, Lee H-J, Lin F-H. 11 - Advances in resting-state fMRI acquisition: Highly accelerated fMRI, Advances in Resting-State Functional MRI 2023; :255–275

Non Peer-Reviewed Publications

  1. O’Donoghue MC, Blane J, Semple J, Rieger S, Aikin N, Campbell J, Pretorius P, Griffanti L, Gillis G, Okell TW, Chiew M, Smith SM, Miller KL, & Mackay CE. (2022). WIN MR Protocol: Oxford Brain Health Centre (2019_102_BHC). Zenodo. https://doi.org/10.5281/zenodo.6598036
  2. Magnetic Resonance in Medicine Highlights Magazine, Volume 6 (2021) - Editor
  3. Magnetic Resonance in Medicine Highlights Magazine, Volume 5 (2020) - Editor
  4. Q&A with Lia Hocke, Yunjie Tong, and Blaise Frederick, Magnetic Resonance in Medicine Highlights (2016 December 16), http://www.ismrm.org/qa-with-lia-hocke-yunjie-tong-and-blaise-de-frederick/
  5. Q&A with Klaus Scheffler and Philipp Ehses, Magnetic Resonance in Medicine Highlights (2016 July 21), http://www.ismrm.org/qa-with-klaus-scheffler-and-philipp-ehses
  1. Q&A with Aaron T. Hess and Mark Chiew, Magnetic Resonance in Medicine Highlights (2021 December 10), https://blog.ismrm.org/2021/12/10/qa-with-aaron-t-hess-and-mark-chiew/

Patents and Intellectual Property

  1. Schauman SS, Chiew M, Okell TO “Methods and Systems for Optimizing Sampling Efficiency of Dynamically Sampled Magnetic Resonance Imaging (MRI), US Patent Application 2022/0146615 A1(pending)
  2. Chiew M, Emir UE “Simultaneous Multi-Slice MRSI using Density Weighted Concentric Ring Acquisition”, US Patent US11828822B2 (Granted Nov 28, 2023)
  3. Chiew M, Miller KL, Smith SM, Blumensath T “Acceleration of Low-Rank MRI Data Acquisition”, US Patent (Application 61/808696, Abandoned)

Teaching and Supervision

Teaching & Course Co-Ordination

2023 Course Co-Ordinator, MBP1407H, Magnetic Resonance Imaging - Overview Department of Medical Biophysics, University of Toronto
2023 Course Co-Ordinator, MBP1413H, Biomedical Applications of Artificial Intelligence
Department of Medical Biophysics, University of Toronto
2013 - 19 Co-Organiser, Head Tutor and Lecturer, FMRIB Graduate Program - MRI Physics
Department of Clinical Neurosciences, University of Oxford
2012 - 13 Tutor and Lecturer, FMRIB Graduate Program
Department of Clinical Neurosciences, University of Oxford
2010 - 11 Teaching Assistant, PHY231, Physics for the Life Sciences
Department of Physics, University of Toronto
2010 Lab Demonstrator, PHY324 H1S, Practical Physics II
Department of Physics, University of Toronto

Invited Educational Lectures and Presentations

2024 Teaching Lecture, “Recent MRI Research and Innovation”
2nd ISMRM African Chapter Conference & 2nd Subsaharan MRI Training Workshop, Dar es Salaam, Tanzania
2024 Educational Lecture, “Open Source Challenges and Opportunities”
Weekday Educational Course, ISMRM 2024 Annual Meeting, Singapore
2023 Teaching Lecture, “Image Acquisition and Interpretation”
1st ISMRM African Chapter Conference & 2nd Subsaharan MRI Training Workshop, Accra, Ghana
2023 Teaching Presentation, MRI Artifacts Gameshow
Weekday Educational Course, ISMRM 2023 Annual Meeting, Toronto, Canada
2021 Teaching Lecture, “Low Rank and Structured Low Rank Reconstruction Approaches”, Image Reconstruction
Weekend Educational Course, ISMRM 2021 Virtual Annual Meeting
2014 - 19 Lecturer, EPSRC-MRC Centre for Doctoral Training in Biomedical Imaging
University of Oxford
2014 - 19 Faculty Lecturer, Physics Lectures
FSL Course
2017 Teaching Lecture, “Measuring Connectivity with RS-FMRI”, Connectivity: Structure & Function
Weekend Educational Course, ISMRM 2017 Annual Meeting, Honolulu, USA
2013 Teaching Lecture, “MRI Basics and Diffusion Imaging”
Hospital for Sick Children, University of Toronto
2013 Teaching Lecture, “Compressed Sensing”, Teaching Session on Highly Accelerated FMRI
ESMRMB 2013 Congress, Toulouse, France
2011 Teaching Lecture, “Fast Functional MRI”, Annual MRI Retreat
Sunnybrook Research Institute, University of Toronto
2010 Invited Lecture, “Conversation with a Scientist”, Summer Research Rounds
Rotman Research Institute, University of Toronto

Post-Doctoral Supervision

2021 - 24 Charles Millard, University of Oxford
Project: Self-Supervised Learning Methods in MRI
2020 - 23 Mo Shahdloo, University of Oxford
Project: Model-Based Off-Resonance Correction for Accelerated Non-Human Primate Imaging
2015 - 16 Lior Weizman, Visiting Fellow, Technion - Israel Institute of Technology (co-supervisor)
Project: Low-Rank + Sparse Decomposition for Accelerated fMRI

Graduate Student Supervision

2024 - Fatemeh Ebrahiminia, PhD Student, University of Toronto
Thesis: TBD
2023 - Hao Li, DPhil Student, University of Oxford (co-supervisor)
Thesis: TBD
2023 - Minhao Hu, DPhil Student, University of Oxford (co-supervisor)
Thesis: TBD
2023 - Clara Zaki, MSc Student, University of Toronto
Thesis: TBD
2022 - Brenden Kadota, MSc Student, University of Toronto
Thesis: TBD
2019 - 23 Xi Chen, DPhil Student, University of Oxford
Thesis: Structured Low Rank Methods for Robust 3D Multi-Shot EPI
2017 - 20 S. Sophie Schauman, DPhil Student, University of Oxford
Thesis: Improving Acquisition Speed and Efficiency of Advanced Arterial Spin Labelling MRI
2016 - 20 Harry Mason, DPhil Student, University of Oxford
Thesis: Exploring subspace-constrained approaches to low-rank fMRI acceleration
2013 - 16 Nadine N. Graedel, DPhil Student, University of Oxford
Thesis: Three-Dimensional Hybrid Radial Cartesian Echo Planar Imaging for Functional MRI

Undergraduate Student Supervision

2024 Kevin Zhang, Integrated Biomedical Engineering and Health Science, McMaster University
Summer Research Volunteer: Investingating k-space motion detection networks
2024 Stephie Liu, Biomedical Engineering, University of Waterloo
Sunnybrook Summer Student Program: MRI data synthesis with latent diffusion models
2023 Jisu Jung, Human Biology Program, University of Toronto
HMB496 Summer Research Project: Sex biases in machine learning of human brain features
2014 - 16 Charles Guan, Electrical Engineering, Stanford University (Undergraduate Thesis)
Thesis: Sparsity and Low-Rank Constraints in Functional MRI

Supervisory Committees

2024 - Emma McKnight, MSc Supervisory Committe, University of Toronto
2023 - Nayana Menon, MASc Supervisory Committee, University of Toronto
2023 - Jason Rock, MSc Supervisory Committee, University of Toronto
2022 - Navona Calarco, PhD Supervisory Committee, University of Toronto
2019 Pingyu Xia, PhD Committee, Purdue University

Examinations

2024 Jun Troy Umolac, Univeresity of Toronto, PhD Reclassification Examination Committee Member
2024 Jun Moujan Saderi, University of Toronto, MSc Oral Examination Committee Member
2023 Oct Samal Munidasa, University of Toronto, PhD Oral Examination Committee Member
2023 Oct Navona Calarco, University of Toronto, PhD Qualifying Examination Committee Member
2022 Dec Qijia Shen, University of Oxford, DPhil Transfer of Status Assessor
2022 Oct Ying-Qiu Zheng, University of Oxford, DPhil Confirmation of Status Assessor
2021 Dec Andrew Tyler, University of Oxford, DPhil Viva Voce Examination
2021 Mar Conor Keogh, University of Oxford, DPhil Transfer of Status Assessor
2021 Jan Ying-Qiu Zheng, University of Oxford, DPhil Transfer of Status Assessor
2020 Dec Ryan Timms, University of Oxford, DPhil Confirmation of Status Assessor
2020 Dec Charles Millard, University of Oxford, DPhil Confirmation of Status Assessor
2020 Nov Thijs De Buck, University of Oxford, DPhil Transfer of Status Assessor
2020 Oct Evan Roberts, University of Oxford, DPhil Transfer of Status Assessor
2019 Dec Ryan Timms, University of Oxford, DPhil Transfer of Status Assessor
2019 Nov Evan Edmond, University of Oxford, DPhil Transfer of Status Assessor
2019 Oct Charles Millard, University of Oxford, DPhil Transfer of Status Assessor
2019 Jul Feng Qi, University of Oxford, DPhil Viva Voce Examination
2018 Dec Sven Jaeschke, University of Oxford, DPhil Confirmation of Status Assessor
2017 Nov Jack Allen, University of Oxford, DPhil Confirmation of Status Assessor
2017 Nov Joseph Woods, University of Oxford, DPhil Confirmation of Status Assessor
2017 Aug Caitlin O’Brien, University of Oxford, DPhil Transfer of Status Assessor
2016 Aug Jack Allen, University of Oxford, DPhil Transfer of Status Assessor
2015 Jan Wenchuan Wu, University of Oxford, DPhil Transfer of Status Assessor

Professional Activities

Editorial Boards

2023 - Review Editor, Brain Imaging Methods, Frontiers in Neuroimaging

Ad Hoc Journal Reviewer

Ad Hoc Conference Reviewer

Grant Reviewer

Seminars, Panels and Moderation

May 07, 2024 Moderator, ISMRM 2024 Clinical Translation Challenge Scientific Session, Singapore
May 06, 2024 Moderator, ISMRM 2024 Image Reconstruction Scientific Session, Singapore
Dec 14, 2023 Fetal/Neonatal MRI, Joint MFM-NICU Research Meeting, Sunnybrook Research Institute
Nov 23, 2023 Panelist, Workshop: How to write academic papers, Sunnybrook Research Institute
Jan 20, 2023 Chair, MaLMIC Forum on Machine Learning in Image Reconstruction
Speakers: Ge Wang, Charlie Millard
Jun 18, 2018 Moderator, ISMRM Pulse Sequence Highlights Powerpitch Session, Paris
2017 - 20 WIN Methods Seminar Co-Organiser
2010 - 11 Co-coordinator, Rotman Rounds, Rotman Research Institute

Search Committees

2023 Member, Sunnybrook Research Institute Search Committee for Holland Bone & Joint Program Scientist
2023 Member, Sunnybrook Research Institute Search Committee for Tier 1 Canada Research Chair

Committees & Service

2024 - Co-ordinator, MR Group Seminar Series, Sunnybrook Research Institute
2023 Member, ISMRM Clinical Translation Unmet Needs Challenge Committee
2023 - 26 Member, ISMRM Publications Committee
2021 - 22 Co-chair, ISMRM AMPC Image Acquisition Educational Table
2020 - 23 Member, ISMRM Annual Meeting Program Committee
2020 - 22 Chair, Oxford WIN Working Group on Ethnic and Racial Diversity
2020 - 22 Member, Oxford WIN EDI Committee
2019 - 20 Editor, Magnetic Resonance in Medicine Highlights Magazine
2013 - 18 MRI Scheduling Co-ordinator, FMRIB Physics Group, University of Oxford

Professional Affiliations

Last updated: September 18, 2024